Add `--cont-quant-exclude [tag]`

[enryH]

Description of feature

I would be nice to be able to set the command line option (cli arguments):

--cont-quant-exclude [tag] peptides corresponding to protein sequence ids tagged with the specified tag will be excluded from normalisation as well as quantification of protein groups that do not include proteins with the tag

This allows to only use a subset of species in an experiment to be considered for relative quantification, if I understand it correctly.

In general, is the aim to represent most of the DIANN parameters available to be set in quantmsdiann?

[enryH]

So using args I should be able to pass that argument on to this step. If I re-use the quant files, does quantms jump directly to the final quantification step?

https://github.com/bigbio/quantmsdiann/blob/baef81d67054ba050fea9c0ea578f5bceb777098/modules/local/diann/final_quantification/main.nf