A collaboratively written review paper on deep learning, genomics, and precision medicine

📜 🎉 Automated reporting of objects in R

papaja (Preparing APA Journal Articles) is an R package that provides document formats to produce complete APA manuscripts from RMarkdown-files (PDF and Word documents) and helper functions that facilitate reporting statistics, tables, and plots.

An R-tool for comprehensive science mapping analysis. A package for quantitative research in scientometrics and bibliometrics.

Clone me to create your Manubot manuscript

Minimalist LaTeX template for academic papers

Ten Quick Tips for Deep Learning in Biology

📚 Virtual Intelligent Publishing Assistant (Vipa): A journal management and publishing software

A collaborative review of the emerging COVID-19 literature. Join the chat here:

Extracting and quantifying graphical representations of river and delta channel networks from binary masks

A checklist to help you avoid all those minor errors when submitting a scientific manuscript

AutoLayoutKit in pure Swift.

Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · 2016

From one sentence to a publishable book. 21 AI skills for Claude Code that automate the entire book writing pipeline — research, characters, writing, scoring, revision, and editorial package.

A repository to practice contributing to a Manubot manuscript

📓 Non-parametric Bayesian Inference for Conservation Decisions

Manuscript for the Sci-Hub Coverage Study

Delineating watershed basins and computing attribute statistics using Google Earth Engine

An example of using make for a data analysis project

TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020